BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H03SP1|AL426746
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1464 0.0
>3x_Contig1737
Length = 17214
Score = 1464 bits (735), Expect = 0.0
Identities = 771/784 (98%), Gaps = 3/784 (0%)
Strand = Plus / Minus
Query: 1 gtaccgagacccaaatcgactagcgcaccgatgatacctttatcagaattttgaccggat 60
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7481 gtaccgagaccccaaacgactagcgcaccgatgatacctttatcagaattttgaccggat 7422
Query: 61 ctgaaatggtacaagatacccattgcgaccatccatagggaacaaccagcgatgatgaat 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7421 ctgaaatggaacaagatacccattgcgaccatccatagggaacaaccagcgatgatgaat 7362
Query: 121 ggcrtattaatctggtgaatctagtgatgaatagcgcatagaaaggcgaaaatacggtgg 180
||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7361 ggctt--taatctggtgaatctagtgatgaatagcgcaaagaaaggcgaaaatacggtgg 7304
Query: 181 aagtgaaggtactgacactggaaawtctggtggcagaagtgacactttcattcacagcaa 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7303 aagtgaaggtactgacactggaaattctggtggcagaagtgacactttcattcacagcaa 7244
Query: 241 ccatcaagawtgtgtacaagtaacctgcggccatggtgaagatgaagwtgatcaagaagg 300
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7243 ccatcaagattgtgtacaagtaacctgcggccatggtgaagatgaagttgatcaagaagg 7184
Query: 301 caatacacaaagcagcccaaataccacggtctctcaacaacttgaatggagcaawtggtt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 7183 caatacacaaagcagcccaaataccacggtctctcaacaacttgaatggagcaattggtt 7124
Query: 361 cacgagcccatttggattcccatgcgataaagaatgggatcaagacgaaacctaagatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7123 cacgagcccatttggattcccatgcgataaagaatgggatcaagacgaaacctaagatga 7064
Query: 421 atggagcaatgatatgtggattgttccatttgwttgagataccacctgctagagtcaatg 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7063 atggagcaatgatatgtggattgttccatttgtttgagataccacctgctagagtcaatg 7004
Query: 481 ggaccaagatacaaccaaggataataatcatgaagaaaacaccaatgacgtccaatttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7003 ggaccaagatacaaccaaggataataatcatgaagaaaacaccaatgacgtccaatttcc 6944
Query: 541 aaaacaattgaaccagactttgtacgagcccatgtgtttggtagtaagtcttttgagagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6943 aaaacaattgaaccagactttgtacgagcccatgtgtttggtagtaagtcttttgagagg 6884
Query: 601 acaattctttccaggcctcggtttgtctagctctccatttcatatgtagcatacaaccca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6883 acaattctttccaggcctcggtttgtctagctctccatttcatatgtagcatacaaccca 6824
Query: 661 acaatggcaaacaactcaatgggaaaatgaatgcccacatagcaatgtcccaagaccaat 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6823 acaatggcaaacaactcaatgggaaaatgaatgcccacatagcaatgtcccaagaccaa- 6765
Query: 721 ttttgttctggcttggcgacatcgacaatgttaccagagatccaagtgttgataataaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6764 ttttgttctggcttggcgacatcgacaatgttaccagagatccaagtgttgataataaat 6705
Query: 781 ggcc 784
||||
Sbjct: 6704 ggcc 6701
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5054
Number of Sequences: 1807
Number of extensions: 5054
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)